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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015822876.1_cds_XP_016501306.1_15053
CDS Infomation

[gene=LOC107819683] [db_xref=GeneID:107819683] [protein=vicilin-like antimicrobial peptides 2-2] [protein_id=XP_016501306.1] [location=join(44151..44445,45086..45261,47069..47149,47245..47502,48120..48402,48561..48763)] [gbkey=CDS]
Sequence

ATGGCAATTTTCAGTAAACCAAAGCTCTTATTTCTCTTCTTCTTGATCCTCTCCATCTTT
CTTGCTTCTCAATGTGATGAAGCAGAGAACAATCCCTACTTATTTAAGTCTCATAGGTTC
AGATCTCGATTTACATCAAAACATGGTGAATTTCGAGTCCTTGAGAAATTCACTGAAAGA
TCTGAACTTCTTGGAGGACTAGAGAAGTATAGAGTTGCAGTCCTTGAATTTGAACCTCTG
TCTTTCATGCTTCCTCATCACTGTGATGCTGAAGTCATATTTTTTGTTGTTAGAGGAAGA
GGAACCATAAGTATAGCAGAACAGGATGAGCAGAACTCCTTCAACTTGGAGCATGGAGAT
GTAATCAGAGTTAATGCTGGTTCAACAATCTACATGATCAACAGGGATAACAATGAAAGG
TTCTTTGTTTACGTGCTAGCCAAGACAGTTAATATTCCTGGCCAATTTCAGGAATACTTT
AGTGGTGGAGGTGAAAATCCAGAATCCTTCTACAGAGCTTTCAGCAGTGAGATTCTGGAG
ACTGCTTTCAATACCTCAATTGACACGATAGAGGGGCTATTGGGACAACAAAGAAAGGGA
ATATTTGTCAAAGCCTCTGAAGAGCAAATTAGAGCAATAAGCGAACACGCTTCACTCTCC
ACTAAGCAACAAACTAGAGGTCCTTTCAATCTATTGAATGAACGCCCATTACTTGGAAAC
AACTTTGGACACTACTTTGAAGCAACCCCAGAGAGATTCGAACAGTTGAGGGATTTGGAT
GCTGCTGCTGGTATCATGAACATCAACCAAGGGGGAATGTTATTGCCAGTCTACTGTACA
AGGACAACATGGTTTGTCATGGTTGTAGAAGGAAATGGGCGCTTTGAAATGGCATGCCCT
CATCTTAGTAGCCAAAGCCAAAGCCAGAGACAGGGGCGCCACTACCAGAAAGTCCAAGGT
TCTCTATCAGTTGGTGATGTTATGATAATTCGTGCAGGCCATCCTATTACCGTTATAGCC
ACCGGGGATTCAGAGCTCAGAATGGTTGGTATTGGATTCAATGCTCATAACAACAGAATG
AACTTCCTTGCAGGTCGACAAAGCATATGGAGAAATGTAGACAGAGAAGCAAAAGAAGTG
TCATTCAACAGGCCAGCAAGGGAGGTGGAAGAAATCTTGCAGAAGCAAGATCAGTCCTAT
TTTGTGGCAGGACCAGAGCAGCGACAGCAACAGATGAGGGAAGAAAGAACAAGGGGACAA
CAATATGTTTCTTCAAGTTTGGACTTTGTTTTCTAA

Peptide Sequence

PEP ID

XP_016501306.1
PEP Infomation

PREDICTED: vicilin-like antimicrobial peptides 2-2 [Nicotiana tabacum]
Sequence

MAIFSKPKLLFLFFLILSIFLASQCDEAENNPYLFKSHRFRSRFTSKHGEFRVLEKFTER
SELLGGLEKYRVAVLEFEPLSFMLPHHCDAEVIFFVVRGRGTISIAEQDEQNSFNLEHGD
VIRVNAGSTIYMINRDNNERFFVYVLAKTVNIPGQFQEYFSGGGENPESFYRAFSSEILE
TAFNTSIDTIEGLLGQQRKGIFVKASEEQIRAISEHASLSTKQQTRGPFNLLNERPLLGN
NFGHYFEATPERFEQLRDLDAAAGIMNINQGGMLLPVYCTRTTWFVMVVEGNGRFEMACP
HLSSQSQSQRQGRHYQKVQGSLSVGDVMIIRAGHPITVIATGDSELRMVGIGFNAHNNRM
NFLAGRQSIWRNVDREAKEVSFNRPAREVEEILQKQDQSYFVAGPEQRQQQMREERTRGQ
QYVSSSLDFVF

Transcript Sequence

Gene sequence data has not been registered.